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Accelerating Genomics SNPs Processing and Interpretation with Apache Spark

Accelerating Genomics SNPs Processing and Interpretation with Apache Spark

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Interpretation of SNPs data is a non-trivial task: The analysis of the whole exome and/or whole genome data processing and later on interpretation is a challenging process in which Apache spark usage significantly speeds up the end-to-end analysis from FASTQ to annotated vcf file. In this talk we’ll share how doc.ai implements Apache spark technology for bioinformatics purposes.
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